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Yan Zhang

Profile picture for Yan Zhang

Contact Information

600 S Mathews Ave
Roger Adams Laboratory, Room 405
Urbana, IL 61801
Assistant Professor of Biochemistry

Education

2008  B.S., Mathematics and Physics, Tsinghua University, China

2014  Ph.D., Biochemistry and Molecular Biology, Baylor College of Medicine

2014-2023  Postdoc, University of California, San Francisco

Awards and Honors

2013  Poster Presentation Award, Departments of Biochemistry and Pharmacology Research Conference, Baylor College of Medicine

2012  Oral Presentation Award, 26th Society of Chinese Bioscientists in America, Texas Chapter Annual Symposium

2010  Research Training Fellowship, Cancer Prevention and Research Institute of Texas (CPRIT)

2009  Verna and Marrs Mclean Academic Achievement Award, Baylor College of Medicine

2009  Professor John J. Trentin Scholarship Award, Baylor College of Medicine

Additional Campus Affiliations

Assistant Professor, Biochemistry

Highlighted Publications

Zhang Y*, Aleksashin NA*, Klepacki D, Anderson C, Vázquez-Laslop N, Gross CA, Mankin AS. The context of the ribosome binding site in mRNAs defines specificity of action of kasugamycin, an inhibitor of translation initiation. Proc Natl Acad Sci U S A. 2022 Jan 25;119(4):e2118553119. 

Zhang Y*, Burkhardt DH*, Rouskin S*, Li GW, Weissman JS, Gross CA. A Stress Response that Monitors and Regulates mRNA Structure Is Central to Cold Shock Adaptation. Mol Cell. 2018 Apr 19;70(2):274-286.e7. 

Burkhardt DH*, Rouskin S*, Zhang Y*, Li GW, Weissman JS, Gross CA. Operon mRNAs are organized into ORF-centric structures that predict translation efficiency. Elife. 2017 Jan 31;6. pii: e22037. 

Zhang Y, Mooney RA, Grass JA, Sivaramakrishnan P, Herman C, Landick R, Wang JD. DksA guards elongating RNA polymerase against ribosome-stalling-induced arrest. Mol Cell. 2014 Mar 6;53(5):766-78.

Recent Publications

Zhang Y*, Aleksashin NA*, Klepacki D, Anderson C, Vázquez-Laslop N, Gross CA, Mankin AS. The context of the ribosome binding site in mRNAs defines specificity of action of kasugamycin, an inhibitor of translation initiation. Proc Natl Acad Sci U S A. 2022 Jan 25;119(4):e2118553119. *equal contribution

Zhang Y, Gross CA. Cold shock response in bacteria. Annu Rev Genet. 2021 Nov 23;55:377-400.

Zhang Y*, Burkhardt DH*, Rouskin S*, Li GW, Weissman JS, Gross CA. A Stress Response that Monitors and Regulates mRNA Structure Is Central to Cold Shock Adaptation. Mol Cell. 2018 Apr 19;70(2):274-286.e7. *equal contribution

Baggett NE, Zhang Y, Gross CA. Global analysis of translation termination in E. coli. PLoS Genet. 2017 Mar 16;13(3):e1006676.

Burkhardt DH*, Rouskin S*, Zhang Y*, Li GW, Weissman JS, Gross CA. Operon mRNAs are organized into ORF-centric structures that predict translation efficiency. Elife. 2017 Jan 31;6. pii: e22037. *equal contribution

Li W, Bouveret E, Zhang Y, Liu K, Wang JD, Weisshaar JC. Effects of amino acid starvation on RelA diffusive behavior in live Escherichia coli. Mol Microbiol. 2016 Feb;99(3):571-85.

Zhang Y, Mooney RA, Grass JA, Sivaramakrishnan P, Herman C, Landick R, Wang JD. DksA guards elongating RNA polymerase against ribosome-stalling-induced arrest. Mol Cell. 2014 Mar 6;53(5):766-78.

Merrikh H, Zhang Y, Grossman AD, Wang JD. Replication-transcription conflicts in bacteria. Nat Rev Microbiol. 2012 Jun 6;10(7):449-58.

Tehranchi AK, Blankschien MD, Zhang Y, Halliday JA, Srivatsan A, Peng J, Herman C, Wang JD. The transcription factor DksA prevents conflicts between DNA replication and transcription machinery. Cell. 2010 May 14;141(4):595-605.

Sun Y, Li M, Zhang Y, Liu L, Liu Y, Liu Z, Li X, Lou Z. Crystallization and preliminary crystallographic analysis of Gibberella zeae extracellular lipase. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Sep 1;64(Pt 9):813-5.

Zhang C, Sun Y, Wang W, Zhang Y, Ma M, Lou Z. Crystallization and preliminary crystallographic analysis of human Ca 2+-loaded calbindin-D28k. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Feb 1;64(Pt 2):133-6.

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